Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | DU333_00450 | Not Available | Positive | 82320 - 82658 | 13309.8 |
| xre family transcriptional regulator | DU333_00455 | Not Available | Positive | 82648 - 82938 | 10791.0 |
| outer membrane assembly protein asma | DU333_00460 | Not Available | Negative | 82991 - 84844 | 69036.1 |
| dctp deaminase | DU333_00465 | Not Available | Negative | 84866 - 85447 | 21252.4 |
| uridine kinase | DU333_00470 | Not Available | Negative | 85539 - 86180 | 24354.6 |
| diguanylate cyclase | DU333_00475 | Not Available | Positive | 86498 - 89815 | 123811.0 |
| dna-3-methyladenine glycosylase 2 | DU333_00480 | Not Available | Negative | 89926 - 90774 | 31201.7 |
| molecular chaperone | DU333_00485 | Not Available | Positive | 90908 - 92260 | 49330.1 |
| helix-hairpin-helix domain-containing protein | DU333_00490 | Not Available | Negative | 92273 - 94213 | 71403.5 |
| protein phosphatase 2c domain-containing protein | DU333_00495 | Not Available | Negative | 94210 - 94971 | 27309.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




