Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU333_20995 | Not Available | Negative | 4222980 - 4223222 | 7386.46 |
| glucose-6-phosphate isomerase | DU333_21000 | Not Available | Negative | 4223720 - 4225369 | 61547.1 |
| lysine-sensitive aspartokinase 3 | DU333_21010 | Not Available | Positive | 4225894 - 4227243 | 48580.6 |
| duf3811 domain-containing protein | DU333_21015 | Not Available | Positive | 4227496 - 4227768 | 10546.7 |
| 23s rrna pseudouridine synthase f | DU333_21020 | Not Available | Negative | 4227769 - 4228641 | 32450.4 |
| sugar-binding transcriptional regulator | DU333_21025 | Not Available | Positive | 4228989 - 4229936 | 34916.8 |
| sdr family oxidoreductase | DU333_21030 | Not Available | Positive | 4230006 - 4230812 | 29054.7 |
| pts sorbose transporter subunit iia | DU333_21035 | Not Available | Positive | 4230822 - 4231229 | 14864.0 |
| pts system mannose/fructose/n-acetylgalactosamine-transporter subunit iib | DU333_21040 | Not Available | Positive | 4231229 - 4231723 | 18405.2 |
| pts mannose/fructose/sorbose transporter subunit iic | DU333_21045 | Not Available | Positive | 4231789 - 4232586 | 28032.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




