Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| redox-sensitive transcriptional activator soxr | DU333_20745 | Not Available | Negative | 4164968 - 4165432 | 17249.9 |
| regulatory protein soxs | DU333_20750 | Not Available | Positive | 4165518 - 4165841 | 12911.6 |
| eal domain-containing protein | DU333_20755 | Not Available | Negative | 4165844 - 4167430 | 60696.4 |
| hypothetical protein | DU333_20760 | Not Available | Positive | 4167859 - 4168140 | 10288.0 |
| ssdna-binding protein | DU333_20765 | Not Available | Negative | 4168239 - 4168775 | 18976.1 |
| excinuclease abc subunit uvra | DU333_20770 | Not Available | Positive | 4169029 - 4171851 | 103890.0 |
| mmcq/yjbr family dna-binding protein | DU333_20775 | Not Available | Negative | 4171886 - 4172242 | 13520.2 |
| yjbq family protein | DU333_20780 | Not Available | Negative | 4172246 - 4172662 | 15626.7 |
| acid phosphatase apha | DU333_20785 | Not Available | Negative | 4172773 - 4173486 | 26076.9 |
| sensor histidine kinase | DU333_20790 | Not Available | Positive | 4173763 - 4175583 | 69236.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




