Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ammonia-forming nitrite reductase cytochrome c552 subunit | DU333_20695 | Not Available | Negative | 4153079 - 4154515 | 53678.6 |
| hypothetical protein | DU333_20700 | Not Available | Negative | 4154436 - 4154633 | 7772.32 |
| acetate--coa ligase | DU333_20705 | Not Available | Positive | 4154907 - 4156865 | 72015.3 |
| duf485 domain-containing protein | DU333_20710 | Not Available | Positive | 4157157 - 4157471 | 11658.3 |
| cation acetate symporter | DU333_20715 | Not Available | Positive | 4157468 - 4159117 | 59161.7 |
| lrgb family protein | DU333_20720 | Not Available | Negative | 4159156 - 4159845 | 24803.3 |
| cida/lrga family protein | DU333_20725 | Not Available | Negative | 4159838 - 4160248 | 15472.9 |
| lysr family transcriptional regulator | DU333_20730 | Not Available | Positive | 4160352 - 4161236 | 33106.7 |
| na+/h+ antiporter | DU333_20735 | Not Available | Negative | 4161272 - 4162921 | 60526.6 |
| ncs2 family permease | DU333_20740 | Not Available | Negative | 4163072 - 4164421 | 45762.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




