Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DU333_20645 | Not Available | Positive | 4144009 - 4144845 | 31072.8 |
| abc transporter atp-binding protein | DU333_20650 | Not Available | Positive | 4144832 - 4145536 | 26449.0 |
| sel1 repeat family protein | DU333_20655 | Not Available | Positive | 4145647 - 4146336 | 25110.5 |
| glutamate/aspartate:proton symporter gltp | DU333_20660 | Not Available | Negative | 4146484 - 4147797 | 47108.0 |
| heme lyase nrfefg subunit nrfg | DU333_20665 | Not Available | Negative | 4148140 - 4148736 | 22859.6 |
| heme lyase nrfefg subunit nrff | DU333_20670 | Not Available | Negative | 4148733 - 4149116 | 14646.1 |
| heme lyase ccmf/nrfe family subunit | DU333_20675 | Not Available | Negative | 4149109 - 4150731 | 60154.7 |
| cytochrome c nitrite reductase subunit nrfd | DU333_20680 | Not Available | Negative | 4150847 - 4151803 | 35005.3 |
| cytochrome c nitrite reductase fe-s protein | DU333_20685 | Not Available | Negative | 4151800 - 4152471 | 24564.8 |
| cytochrome c nitrite reductase pentaheme subunit | DU333_20690 | Not Available | Negative | 4152468 - 4153034 | 20657.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




