Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | DU333_20540 | Not Available | Positive | 4120210 - 4121346 | 42066.9 |
| ribose 1,5-bisphosphokinase | DU333_20545 | Not Available | Positive | 4121346 - 4121903 | 20733.7 |
| aminoalkylphosphonate n-acetyltransferase | DU333_20550 | Not Available | Positive | 4121890 - 4122324 | 16561.8 |
| phosphonate metabolism protein phnp | DU333_20555 | Not Available | Positive | 4122326 - 4123084 | 27923.3 |
| protein yjdp | DU333_20560 | Not Available | Negative | 4123112 - 4123441 | 13439.4 |
| ribose 5-phosphate isomerase b | DU333_20565 | Not Available | Negative | 4123510 - 4123959 | 16102.3 |
| murr/rpir family transcriptional regulator | DU333_20570 | Not Available | Positive | 4124318 - 4125208 | 32364.1 |
| d-allose transporter substrate-binding protein | DU333_20575 | Not Available | Positive | 4125267 - 4126202 | 32897.7 |
| d-allose abc transporter atp-binding protein alsa | DU333_20580 | Not Available | Positive | 4126329 - 4127861 | 56788.4 |
| ribulose-phosphate 3-epimerase | DU333_20590 | Not Available | Positive | 4128831 - 4129526 | 26024.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




