Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate decarboxylase | DU333_19990 | Not Available | Negative | 4020105 - 4020529 | 16032.2 |
| is1 family transposase | DU333_19995 | Not Available | Negative | 4020530 - 4020601 | 2454.95 |
| amino acid permease | DU333_20000 | Not Available | Negative | 4020744 - 4022186 | 51799.6 |
| arginine decarboxylase | DU333_20005 | Not Available | Negative | 4022318 - 4024687 | 88728.2 |
| amino acid permease | DU333_20010 | Not Available | Negative | 4024792 - 4026261 | 53413.7 |
| hypothetical protein | DU333_20020 | Not Available | Positive | 4027208 - 4027432 | 8457.12 |
| alcohol dehydrogenase | DU333_20025 | Not Available | Positive | 4027825 - 4028172 | 12422.8 |
| nucleotidyltransferase | DU333_20040 | Not Available | Positive | 4029739 - 4031067 | 51003.9 |
| slatt domain-containing protein | DU333_20045 | Not Available | Positive | 4031075 - 4031650 | 21852.5 |
| hypothetical protein | DU333_20050 | Not Available | Negative | 4031784 - 4031981 | 7731.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




