Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemin import atp-binding protein hmuv | DU333_19935 | Not Available | Positive | 4008354 - 4009124 | 28882.0 |
| mgtc/sapb family protein | DU333_19940 | Not Available | Negative | 4009176 - 4009823 | 23184.9 |
| acid stress chaperone hdeb | DU333_19945 | Not Available | Negative | 4009887 - 4010213 | 12043.5 |
| acid-activated periplasmic chaperone hdea | DU333_19950 | Not Available | Negative | 4010329 - 4010661 | 11831.2 |
| hded family acid-resistance protein | DU333_19955 | Not Available | Positive | 4010916 - 4011488 | 20904.7 |
| hypothetical protein | DU333_19965 | Not Available | Negative | 4012769 - 4013098 | 11645.0 |
| multidrug resistance protein mdte | DU333_19970 | Not Available | Positive | 4013158 - 4014315 | 41162.9 |
| multidrug efflux rnd transporter permease subunit | DU333_19975 | Not Available | Positive | 4014340 - 4017453 | 111564.0 |
| transcriptional regulator | DU333_19980 | Not Available | Negative | 4017816 - 4018544 | 28114.2 |
| transcriptional regulator | DU333_19985 | Not Available | Negative | 4018913 - 4019737 | 31308.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




