Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane lipoprotein slp | DU333_19885 | Not Available | Positive | 3998866 - 3999432 | 20949.1 |
| helix-turn-helix transcriptional regulator | DU333_19890 | Not Available | Positive | 3999585 - 4000115 | 20422.5 |
| hemin-degrading factor | DU333_19895 | Not Available | Negative | 4000172 - 4001200 | 38628.8 |
| tonb-dependent hemoglobin/transferrin/lactoferrin family receptor | DU333_19900 | Not Available | Negative | 4001249 - 4003231 | 72458.9 |
| hypothetical protein | DU333_19905 | Not Available | Positive | 4003137 - 4003328 | 7009.55 |
| hemin abc transporter substrate-binding protein | DU333_19910 | Not Available | Positive | 4003915 - 4004829 | 32882.1 |
| heme anaerobic degradation radical sam methyltransferase chuw/hutw | DU333_19915 | Not Available | Positive | 4004849 - 4006186 | 49549.2 |
| heme utilization cystosolic carrier protein hutx | DU333_19920 | Not Available | Positive | 4006199 - 4006693 | 18287.8 |
| anaerobilin reductase | DU333_19925 | Not Available | Positive | 4006693 - 4007316 | 21801.1 |
| iron abc transporter permease | DU333_19930 | Not Available | Positive | 4007401 - 4008357 | 34014.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




