Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4'-phosphopantetheinyl transferase acpt | DU333_19725 | Not Available | Positive | 3966600 - 3967187 | 21715.8 |
| nickel abc transporter, nickel/metallophore periplasmic binding protein | DU333_19730 | Not Available | Positive | 3967298 - 3968872 | 58824.2 |
| nickel abc transporter permease subunit nikb | DU333_19735 | Not Available | Positive | 3968872 - 3969816 | 35165.2 |
| nickel abc transporter permease subunit nikc | DU333_19740 | Not Available | Positive | 3969813 - 3970646 | 30391.9 |
| nickel import atp-binding protein nikd | DU333_19745 | Not Available | Positive | 3970646 - 3971410 | 26814.1 |
| nickel import atp-binding protein nike | DU333_19750 | Not Available | Positive | 3971407 - 3972213 | 29696.4 |
| nickel-responsive transcriptional regulator nikr | DU333_19755 | Not Available | Positive | 3972219 - 3972620 | 15094.7 |
| gntr family transcriptional regulator | DU333_19760 | Not Available | Positive | 3972819 - 3973565 | 28379.2 |
| pts sugar transporter subunit iia | DU333_19765 | Not Available | Positive | 3973590 - 3974063 | 17433.3 |
| pts sugar transporter subunit iib | DU333_19770 | Not Available | Positive | 3974060 - 3974341 | 9823.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




