Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hisf | DU333_00240 | Not Available | Positive | 35046 - 35822 | 28402.1 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | DU333_00245 | Not Available | Positive | 35816 - 36427 | 22766.1 |
| lps o-antigen chain length determinant protein wzzb | DU333_00250 | Not Available | Negative | 36610 - 37590 | 36284.8 |
| udp-glucose 6-dehydrogenase | DU333_00255 | Not Available | Negative | 37735 - 38901 | 43673.6 |
| phosphogluconate dehydrogenase (nadp(+)-dependent, decarboxylating) | DU333_00260 | Not Available | Negative | 39148 - 40554 | 51470.2 |
| lta synthase family protein | DU333_00265 | Not Available | Negative | 40690 - 42087 | 52560.8 |
| glycosyltransferase family 2 protein | DU333_00285 | Not Available | Negative | 46103 - 46990 | 33876.9 |
| hypothetical protein | DU333_00290 | Not Available | Negative | 46983 - 47945 | 37500.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DU333_00295 | Not Available | Negative | 48014 - 48571 | 21201.2 |
| hypothetical protein | DU333_00300 | Not Available | Negative | 48592 - 49641 | 39235.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




