Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspi | DU333_18960 | Not Available | Positive | 3807094 - 3807489 | 14584.0 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | DU333_18965 | Not Available | Positive | 3807482 - 3808069 | 22246.6 |
| general secretion pathway protein gspk | DU333_18970 | Not Available | Positive | 3808062 - 3809045 | 37468.5 |
| type ii secretion system protein gspl | DU333_18975 | Not Available | Positive | 3809060 - 3810223 | 44622.3 |
| type ii secretion system protein m | DU333_18980 | Not Available | Positive | 3810220 - 3810681 | 17299.8 |
| prepilin peptidase | DU333_18985 | Not Available | Positive | 3810681 - 3811358 | 24872.1 |
| bacterioferritin | DU333_18990 | Not Available | Negative | 3811387 - 3811863 | 18496.2 |
| bacterioferritin-associated ferredoxin | DU333_18995 | Not Available | Negative | 3811935 - 3812129 | 7363.04 |
| lysozyme | DU333_19000 | Not Available | Negative | 3812298 - 3815000 | 97522.8 |
| translation elongation factor ef-tu 1 | DU333_19005 | Not Available | Negative | 3815292 - 3816476 | 43286.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




