Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit c | DU333_18610 | Not Available | Negative | 3753069 - 3753308 | 8256.71 |
| atp synthase subunit a | DU333_18615 | Not Available | Negative | 3753355 - 3754170 | 30314.1 |
| atp synthase i | DU333_18620 | Not Available | Negative | 3754179 - 3754559 | 13632.5 |
| ribosomal rna small subunit methyltransferase g | DU333_18625 | Not Available | Negative | 3755176 - 3755799 | 23432.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | DU333_18630 | Not Available | Negative | 3755863 - 3757752 | 69539.4 |
| fmn-binding protein mioc | DU333_18635 | Not Available | Negative | 3758131 - 3758574 | 15808.5 |
| asnc family transcriptional regulator | DU333_18640 | Not Available | Negative | 3758664 - 3759122 | 16888.7 |
| asparagine synthetase a | DU333_18645 | Not Available | Positive | 3759274 - 3760266 | 36724.7 |
| protein viaa | DU333_18650 | Not Available | Negative | 3760271 - 3761722 | 55942.7 |
| atpase rava | DU333_18655 | Not Available | Negative | 3761716 - 3763212 | 56354.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




