Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ethanolamine utilization protein | DU333_00145 | Not Available | Positive | 19398 - 19580 | 6419.74 |
| duf496 family protein | DU333_00150 | Not Available | Negative | 19681 - 20010 | 12778.5 |
| fusc family protein | DU333_00155 | Not Available | Negative | 20182 - 21240 | 39958.7 |
| dna gyrase inhibitor sbmc | DU333_00160 | Not Available | Negative | 21438 - 21911 | 18076.3 |
| serine-type d-ala-d-ala carboxypeptidase dacd | DU333_00165 | Not Available | Negative | 22030 - 23196 | 43348.5 |
| exodeoxyribonuclease i | DU333_00170 | Not Available | Positive | 23405 - 24832 | 54445.6 |
| amino acid transporter | DU333_00175 | Not Available | Negative | 24906 - 26264 | 49554.6 |
| membrane protein yoei | DU333_00180 | Not Available | Negative | 26254 - 26316 | 2241.66 |
| lysr family transcriptional regulator | DU333_00185 | Not Available | Negative | 26531 - 27460 | 34171.9 |
| nad(p)-dependent oxidoreductase | DU333_00190 | Not Available | Negative | 27506 - 28330 | 29681.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




