Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycek/yidq family lipoprotein | DU333_18355 | Not Available | Positive | 3700551 - 3700883 | 11837.3 |
| duf3748 domain-containing protein | DU333_18360 | Not Available | Negative | 3700887 - 3702134 | 46344.3 |
| protein cbra | DU333_18365 | Not Available | Positive | 3702202 - 3703302 | 41528.2 |
| mfs transporter | DU333_18370 | Not Available | Negative | 3703263 - 3704555 | 47092.5 |
| galactonate dehydratase | DU333_18375 | Not Available | Negative | 3704675 - 3705823 | 42555.3 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | DU333_18380 | Not Available | Negative | 3705820 - 3706437 | 21401.8 |
| 2-dehydro-3-deoxygalactonokinase | DU333_18385 | Not Available | Negative | 3706421 - 3707299 | 31447.4 |
| transcriptional regulator | DU333_18390 | Not Available | Negative | 3707296 - 3707985 | 26081.1 |
| hypothetical protein | DU333_18395 | Not Available | Positive | 3708264 - 3708920 | 24084.8 |
| sugar phosphatase yida | DU333_18400 | Not Available | Negative | 3708964 - 3709776 | 29722.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




