Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| jab domain-containing protein | DU333_17945 | Not Available | Negative | 3623706 - 3624374 | 25259.9 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | DU333_17950 | Not Available | Positive | 3624546 - 3625766 | 43426.6 |
| dutp diphosphatase | DU333_17955 | Not Available | Positive | 3625747 - 3626202 | 16184.5 |
| nucleoid occlusion factor slma | DU333_17960 | Not Available | Positive | 3626309 - 3626905 | 22807.7 |
| orotate phosphoribosyltransferase | DU333_17965 | Not Available | Negative | 3626942 - 3627583 | 23582.4 |
| ribonuclease ph | DU333_17970 | Not Available | Negative | 3627649 - 3628365 | 25313.4 |
| yicc family protein | DU333_17975 | Not Available | Positive | 3628492 - 3629355 | 33203.0 |
| dna-directed rna polymerase subunit omega | DU333_18130 | Not Available | Positive | 3651894 - 3652169 | 10237.2 |
| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase | DU333_18135 | Not Available | Positive | 3652188 - 3654296 | 79360.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | DU333_18140 | Not Available | Positive | 3654303 - 3654992 | 25360.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




