Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU333_00085 | Not Available | Positive | 14184 - 14861 | 24919.0 |
| hypothetical protein | DU333_00090 | Not Available | Positive | 14877 - 15287 | 15124.4 |
| duf945 domain-containing protein | DU333_00100 | Not Available | Positive | 15508 - 16329 | 31255.5 |
| antirestriction protein | DU333_00105 | Not Available | Positive | 16420 - 16905 | 18234.3 |
| dna repair protein radc | DU333_00110 | Not Available | Positive | 16921 - 17397 | 17594.3 |
| duf987 domain-containing protein | DU333_00115 | Not Available | Positive | 17466 - 17687 | 8411.2 |
| type iv toxin-antitoxin system yeeu family antitoxin | DU333_00120 | Not Available | Positive | 17761 - 18129 | 13596.2 |
| toxin cbta | DU333_00125 | Not Available | Positive | 18218 - 18592 | 13899.7 |
| hypothetical protein | DU333_00130 | Not Available | Positive | 18589 - 18783 | 6901.13 |
| duf957 domain-containing protein | DU333_00135 | Not Available | Positive | 18796 - 18909 | 4241.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




