Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide 1,2-glucosyltransferase | DU333_17895 | Not Available | Negative | 3614929 - 3615924 | 38464.8 |
| lipopolysaccharide 3-alpha-galactosyltransferase | DU333_17900 | Not Available | Negative | 3615941 - 3616957 | 38784.7 |
| lipopolysaccharide core heptose(i) kinase rfap | DU333_17905 | Not Available | Negative | 3616973 - 3617770 | 31033.1 |
| glycosyltransferase family 1 protein | DU333_17910 | Not Available | Negative | 3617763 - 3618887 | 42530.6 |
| lipopolysaccharide core heptosyltransferase rfaq | DU333_17915 | Not Available | Negative | 3618884 - 3619942 | 39478.9 |
| 3-deoxy-d-manno-octulosonic acid transferase | DU333_17920 | Not Available | Positive | 3620355 - 3621632 | 47327.9 |
| pantetheine-phosphate adenylyltransferase | DU333_17925 | Not Available | Positive | 3621640 - 3622119 | 17895.7 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | DU333_17930 | Not Available | Negative | 3622158 - 3622967 | 30261.8 |
| 50s ribosomal protein l33 | DU333_17935 | Not Available | Negative | 3623065 - 3623232 | 6371.94 |
| 50s ribosomal protein l28 | DU333_17940 | Not Available | Negative | 3623253 - 3623489 | 9007.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




