Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | DU333_17690 | Not Available | Positive | 3568559 - 3569221 | 23576.2 |
| l-ribulose-5-phosphate 3-epimerase | DU333_17695 | Not Available | Positive | 3569214 - 3570074 | 32478.9 |
| l-ribulose-5-phosphate 4-epimerase | DU333_17700 | Not Available | Positive | 3570068 - 3570763 | 25570.5 |
| aldehyde dehydrogenase | DU333_17705 | Not Available | Negative | 3570810 - 3572348 | 56339.5 |
| fic family protein | DU333_17710 | Not Available | Negative | 3572456 - 3573751 | 48429.0 |
| l-threonine dehydrogenase | DU333_17715 | Not Available | Negative | 3573881 - 3575032 | 40366.7 |
| selenocysteinyl-trna-specific translation elongation factor selb | DU333_17720 | Not Available | Negative | 3575223 - 3577067 | 68862.5 |
| l-selenocysteinyl-trna(sec) synthase | DU333_17725 | Not Available | Negative | 3577064 - 3578455 | 50728.4 |
| glutathione s-transferase | DU333_17730 | Not Available | Negative | 3578553 - 3579161 | 22546.3 |
| hlyd family secretion protein | DU333_17735 | Not Available | Negative | 3579232 - 3580368 | 42015.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




