Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna dihydrouridine synthase dusb | DU333_17260 | Not Available | Positive | 3473769 - 3474734 | 35868.2 |
| dna-binding transcriptional regulator fis | DU333_17265 | Not Available | Positive | 3474760 - 3475056 | 11240.6 |
| adenine-specific dna-methyltransferase | DU333_17270 | Not Available | Positive | 3475144 - 3476028 | 33375.3 |
| duf2556 domain-containing protein | DU333_17275 | Not Available | Positive | 3476112 - 3476291 | 7203.93 |
| multidrug efflux transporter transcriptional repressor acrs | DU333_17280 | Not Available | Negative | 3476294 - 3476956 | 25167.7 |
| multidrug efflux rnd transporter periplasmic adaptor subunit acre | DU333_17285 | Not Available | Positive | 3477355 - 3478512 | 41322.0 |
| multidrug efflux rnd transporter permease subunit acrf | DU333_17290 | Not Available | Positive | 3478524 - 3481628 | 111405.0 |
| hypothetical protein | DU333_17295 | Not Available | Positive | 3481881 - 3482102 | 7482.17 |
| amino acid abc transporter substrate-binding protein | DU333_17300 | Not Available | Positive | 3482533 - 3483558 | 37018.8 |
| amino acid abc transporter permease | DU333_17305 | Not Available | Positive | 3483626 - 3484807 | 43243.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




