Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator nanr | DU333_17060 | Not Available | Negative | 3430579 - 3431370 | 29538.0 |
| stringent starvation protein b | DU333_17065 | Not Available | Negative | 3431478 - 3431975 | 18247.4 |
| stringent starvation protein a | DU333_17070 | Not Available | Negative | 3431981 - 3432619 | 24248.2 |
| 30s ribosomal protein s9 | DU333_17075 | Not Available | Negative | 3433014 - 3433406 | 14857.1 |
| 50s ribosomal protein l13 | DU333_17080 | Not Available | Negative | 3433422 - 3433850 | 16019.5 |
| cell division protein zape | DU333_17085 | Not Available | Negative | 3434070 - 3435197 | 43129.2 |
| duf1043 family protein | DU333_17090 | Not Available | Positive | 3435391 - 3435789 | 14961.7 |
| serine endoprotease degq | DU333_17095 | Not Available | Positive | 3435943 - 3437310 | 47249.0 |
| serine endoprotease degs | DU333_17100 | Not Available | Positive | 3437400 - 3438467 | 37599.5 |
| malate dehydrogenase | DU333_17105 | Not Available | Negative | 3438530 - 3439468 | 32339.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




