Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Repressor protein ci | DU333_21295 | Not Available | Positive | 4271340 - 4271909 | 21196.3 |
| hypothetical protein | DU333_21300 | Not Available | Positive | 4271925 - 4272116 | 6805.36 |
| Tyrosine-type recombinase/integrase | DU333_21305 | Not Available | Positive | 4272305 - 4273357 | 39973.7 |
| Attr | Not Available | Not Available | Positive | 4277733 - 4277745 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 94 - 3018 | Not Available |
| helix-turn-helix domain-containing protein | DU333_00005 | Not Available | Negative | 1 - 226 | 8735.65 |
| transposase | DU333_00010 | Not Available | Positive | 372 - 551 | 6800.19 |
| hypothetical protein | DU333_00015 | Not Available | Negative | 528 - 755 | 9039.15 |
| hypothetical protein | DU333_00020 | Not Available | Negative | 777 - 1154 | 13889.7 |
| hypothetical protein | DU333_00025 | Not Available | Positive | 1081 - 1341 | 10208.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




