Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | DU333_16860 | Not Available | Negative | 3392386 - 3393015 | 23336.4 |
| ribosome assembly rna-binding protein yhby | DU333_16865 | Not Available | Positive | 3393141 - 3393434 | 10784.4 |
| transcription elongation factor grea | DU333_16870 | Not Available | Negative | 3393590 - 3394066 | 17642.0 |
| serine-type d-ala-d-ala carboxypeptidase | DU333_16875 | Not Available | Positive | 3394314 - 3395747 | 51871.4 |
| gtpase obge | DU333_16880 | Not Available | Negative | 3395788 - 3396960 | 43258.2 |
| dmt family transporter | DU333_16885 | Not Available | Negative | 3396976 - 3397941 | 34951.2 |
| 50s ribosomal protein l27 | DU333_16890 | Not Available | Negative | 3398068 - 3398325 | 9125.01 |
| 50s ribosomal protein l21 | DU333_16895 | Not Available | Negative | 3398346 - 3398657 | 11565.0 |
| octaprenyl-diphosphate synthase | DU333_16900 | Not Available | Positive | 3398916 - 3399887 | 35205.1 |
| dna-binding transcriptional regulator sfsb | DU333_16905 | Not Available | Positive | 3400120 - 3400398 | 10567.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




