Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| llm class flavin-dependent oxidoreductase | DU333_16760 | Not Available | Positive | 3368799 - 3369806 | 37117.4 |
| tryptophan permease | DU333_16765 | Not Available | Negative | 3369924 - 3371168 | 44413.3 |
| dead/deah box family atp-dependent rna helicase | DU333_16770 | Not Available | Negative | 3371327 - 3373216 | 70550.5 |
| protein yrbn | DU333_16775 | Not Available | Negative | 3373209 - 3373289 | 2979.59 |
| lipoprotein nlpi | DU333_16780 | Not Available | Negative | 3373396 - 3374280 | 33622.5 |
| polyribonucleotide nucleotidyltransferase | DU333_16785 | Not Available | Negative | 3374389 - 3376524 | 77119.6 |
| 30s ribosomal protein s15 | DU333_16790 | Not Available | Negative | 3376771 - 3377040 | 10269.4 |
| trna pseudouridine(55) synthase trub | DU333_16795 | Not Available | Negative | 3377189 - 3378133 | 35089.2 |
| 30s ribosome-binding factor rbfa | DU333_16800 | Not Available | Negative | 3378133 - 3378534 | 15155.4 |
| translation initiation factor if-2 | DU333_16805 | Not Available | Negative | 3378698 - 3381370 | 97284.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




