Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine transporter sstt | DU333_16455 | Not Available | Positive | 3311991 - 3313235 | 43426.3 |
| ygjv family protein | DU333_16460 | Not Available | Negative | 3313239 - 3313790 | 20594.8 |
| altronate dehydratase | DU333_16465 | Not Available | Negative | 3313873 - 3315360 | 54055.2 |
| glucuronate isomerase | DU333_16470 | Not Available | Negative | 3315375 - 3316787 | 53990.1 |
| mfs transporter | DU333_16475 | Not Available | Positive | 3317270 - 3318568 | 46909.0 |
| transcriptional regulator exur | DU333_16480 | Not Available | Positive | 3318698 - 3319474 | 29821.3 |
| deda family protein | DU333_16485 | Not Available | Positive | 3319819 - 3320481 | 24587.0 |
| envz/ompr regulon moderator mzra | DU333_16490 | Not Available | Positive | 3320485 - 3320868 | 14203.0 |
| duf1090 domain-containing protein | DU333_16495 | Not Available | Positive | 3321015 - 3321383 | 13905.5 |
| duf883 domain-containing protein | DU333_16500 | Not Available | Positive | 3321421 - 3321726 | 11052.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




