Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol:disulfide interchange protein dsba/dsbl | DU333_16205 | Not Available | Positive | 3255136 - 3255804 | 24381.4 |
| protein-disulfide oxidoreductase dsbi | DU333_16210 | Not Available | Positive | 3255819 - 3256490 | 25118.3 |
| 4,5-dopa dioxygenase extradiol | DU333_16215 | Not Available | Negative | 3256536 - 3257351 | 29789.9 |
| zinc transporter zupt | DU333_16220 | Not Available | Positive | 3257467 - 3258240 | 26486.5 |
| fimbrial-like protein | DU333_16225 | Not Available | Positive | 3259043 - 3259606 | 19716.3 |
| fimbrial biogenesis outer membrane usher protein | DU333_16230 | Not Available | Positive | 3259693 - 3262215 | 93501.2 |
| fimbrial assembly protein | DU333_16235 | Not Available | Positive | 3262231 - 3262971 | 27389.4 |
| pilus assembly protein | DU333_16240 | Not Available | Positive | 3262968 - 3264017 | 39311.2 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | DU333_16245 | Not Available | Negative | 3264071 - 3264724 | 23340.8 |
| accessory factor ubik family protein | DU333_16250 | Not Available | Positive | 3265098 - 3265397 | 11439.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




