Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Terminase endonuclease subunit | DU333_21195 | Not Available | Negative | 4257322 - 4257972 | 23798.6 |
| Major capsid protein, p2 family | DU333_21200 | Not Available | Negative | 4257976 - 4259034 | 39182.4 |
| Gpo family capsid scaffolding protein | DU333_21205 | Not Available | Negative | 4259051 - 4259884 | 30601.8 |
| Terminase atpase subunit family protein | DU333_21210 | Not Available | Positive | 4260027 - 4261793 | 67036.4 |
| Portal protein | DU333_21215 | Not Available | Positive | 4261793 - 4262839 | 39684.6 |
| Sinr | DU333_21220 | Not Available | Negative | 4262894 - 4263163 | 10597.5 |
| hypothetical protein | DU333_21225 | Not Available | Negative | 4263604 - 4264020 | 14982.4 |
| hypothetical protein | DU333_21230 | Not Available | Negative | 4264013 - 4264276 | 9715.77 |
| Hypothetical protein | DU333_21235 | Not Available | Negative | 4264279 - 4265172 | 32750.4 |
| Dna damage inducible protein | DU333_21240 | Not Available | Negative | 4265309 - 4265614 | 11902.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




