Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4092 domain-containing protein | DU333_15800 | Not Available | Negative | 3163687 - 3168249 | 167292.0 |
| glycolate permease glca | DU333_15805 | Not Available | Negative | 3168733 - 3170415 | 58937.7 |
| malate synthase g | DU333_15810 | Not Available | Negative | 3170771 - 3172942 | 80555.2 |
| protein glcg | DU333_15815 | Not Available | Negative | 3172964 - 3173368 | 13737.5 |
| glycolate oxidase iron-sulfur subunit | DU333_15820 | Not Available | Negative | 3173373 - 3174596 | 45158.9 |
| glycolate oxidase subunit glce | DU333_15825 | Not Available | Negative | 3174607 - 3175659 | 38329.2 |
| glycolate oxidase subunit glcd | DU333_15830 | Not Available | Negative | 3175659 - 3177158 | 53859.0 |
| transcriptional regulator glcc | DU333_15835 | Not Available | Positive | 3177409 - 3178173 | 28796.9 |
| n-acetyltransferase | DU333_15840 | Not Available | Negative | 3178180 - 3179322 | 43495.8 |
| fatty acyl-amp ligase | DU333_15845 | Not Available | Positive | 3179684 - 3181417 | 63784.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




