Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| neue protein | DU333_15695 | Not Available | Negative | 3143990 - 3145138 | 44860.1 |
| udp-n-acetylglucosamine 2-epimerase (hydrolyzing) | DU333_15700 | Not Available | Negative | 3145131 - 3146306 | 44213.1 |
| acylneuraminate cytidylyltransferase | DU333_15705 | Not Available | Negative | 3146303 - 3147559 | 48623.9 |
| n-acetylneuraminate synthase | DU333_15710 | Not Available | Negative | 3147559 - 3148599 | 38647.7 |
| acetyltransferase | DU333_15715 | Not Available | Negative | 3148596 - 3149219 | 22687.6 |
| polysialic acid transport atp-binding protein kpst | DU333_15720 | Not Available | Negative | 3149269 - 3149928 | 24940.1 |
| polysialic acid transporter kpsm | DU333_15725 | Not Available | Negative | 3149925 - 3150701 | 29559.4 |
| type ii secretion system protein | DU333_15730 | Not Available | Negative | 3151759 - 3152295 | 20401.7 |
| type ii secretion system protein gspl | DU333_15735 | Not Available | Negative | 3152297 - 3153475 | 44246.5 |
| general secretion pathway protein gspk | DU333_15740 | Not Available | Negative | 3153472 - 3154449 | 36514.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




