Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| usher protein ecpc | DU333_15470 | Not Available | Positive | 3100025 - 3102550 | 91327.7 |
| fimbria adhesin ecpd | DU333_15475 | Not Available | Positive | 3102540 - 3104183 | 59964.1 |
| fimbrial chaperone ecpe | DU333_15480 | Not Available | Positive | 3104152 - 3104862 | 26621.7 |
| ykgj family cysteine cluster protein | DU333_15485 | Not Available | Positive | 3105169 - 3105498 | 11830.0 |
| duf1440 domain-containing protein | DU333_15495 | Not Available | Negative | 3105747 - 3106361 | 22984.1 |
| hypothetical protein | DU333_15500 | Not Available | Negative | 3106576 - 3106761 | 6722.32 |
| vacuolating autotransporter toxin vat | DU333_15515 | Not Available | Positive | 3108471 - 3112601 | 148022.0 |
| marr family transcriptional regulator | DU333_15520 | Not Available | Positive | 3112727 - 3113251 | 20011.4 |
| duf4102 domain-containing protein | DU333_15525 | Not Available | Negative | 3113686 - 3114024 | 12542.3 |
| Trna-thr | Not Available | Not Available | Positive | 3114179 - 3114254 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




