Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DU333_15415 | Not Available | Negative | 3092327 - 3093253 | 34314.5 |
| alpha/beta hydrolase | DU333_15420 | Not Available | Positive | 3093410 - 3094330 | 33235.6 |
| nadh-dependent flavin oxidoreductase | DU333_15425 | Not Available | Positive | 3094502 - 3095644 | 41854.2 |
| hypothetical protein | DU333_15430 | Not Available | Positive | 3096118 - 3096219 | 3998.07 |
| 50s ribosomal protein l31 type b | DU333_15435 | Not Available | Positive | 3096584 - 3096847 | 9920.71 |
| 50s ribosomal protein l36 | DU333_15440 | Not Available | Positive | 3096847 - 3096987 | 5466.94 |
| hypothetical protein | DU333_15450 | Not Available | Negative | 3097309 - 3097599 | 10532.3 |
| luxr family transcriptional regulator | DU333_15455 | Not Available | Positive | 3098071 - 3098613 | 21231.8 |
| common pilus major fimbrillin subunit ecpa | DU333_15460 | Not Available | Positive | 3098687 - 3099274 | 20082.4 |
| fimbrial chaperone ecpb | DU333_15465 | Not Available | Positive | 3099331 - 3099999 | 24502.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




