Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DU333_15360 | Not Available | Negative | 3078905 - 3079759 | 31510.3 |
| pyridine nucleotide-disulfide oxidoreductase | DU333_15365 | Not Available | Positive | 3079986 - 3081311 | 48226.1 |
| duf1471 domain-containing protein | DU333_15370 | Not Available | Positive | 3081420 - 3081656 | 8459.25 |
| duf417 domain-containing protein | DU333_15375 | Not Available | Positive | 3081668 - 3082261 | 21888.7 |
| aldo/keto reductase | DU333_15380 | Not Available | Negative | 3082421 - 3083290 | 32718.2 |
| helix-turn-helix domain-containing protein | DU333_15385 | Not Available | Positive | 3083538 - 3084395 | 33960.8 |
| intimin-like adhesin fdec | DU333_15395 | Not Available | Negative | 3084520 - 3088770 | 149846.0 |
| aldo/keto reductase | DU333_15400 | Not Available | Positive | 3089336 - 3090187 | 31883.2 |
| aldo/keto reductase | DU333_15405 | Not Available | Positive | 3090214 - 3091203 | 36239.5 |
| lysr family transcriptional regulator | DU333_15410 | Not Available | Negative | 3091234 - 3092127 | 33300.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




