Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein yaia | DU333_14995 | Not Available | Negative | 2998542 - 2998733 | 7267.52 |
| shikimate kinase | DU333_15000 | Not Available | Negative | 2998783 - 2999307 | 19137.0 |
| yaii/yqxd family protein | DU333_15005 | Not Available | Negative | 2999490 - 2999948 | 16970.4 |
| pyrroline-5-carboxylate reductase | DU333_15010 | Not Available | Positive | 3000068 - 3000877 | 28248.7 |
| diguanylate cyclase adra | DU333_15015 | Not Available | Negative | 3000894 - 3002009 | 41515.9 |
| phosphate starvation-inducible protein psif | DU333_15020 | Not Available | Negative | 3002111 - 3002431 | 11687.2 |
| alkaline phosphatase | DU333_15025 | Not Available | Negative | 3002550 - 3003965 | 49472.3 |
| anti-adapter protein irap | DU333_15030 | Not Available | Negative | 3004066 - 3004326 | 9966.07 |
| d-alanine--d-alanine ligase a | DU333_15035 | Not Available | Positive | 3004789 - 3005883 | 39348.1 |
| duf2754 domain-containing protein | DU333_15040 | Not Available | Negative | 3005907 - 3006119 | 8097.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




