Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing sensor histidine kinase | DU333_14940 | Not Available | Negative | 2986507 - 2987802 | 49633.4 |
| phosphate response regulator transcription factor phob | DU333_14945 | Not Available | Negative | 2987860 - 2988549 | 26381.9 |
| exonuclease subunit sbcd | DU333_14950 | Not Available | Positive | 2988739 - 2989941 | 44642.0 |
| exonuclease subunit sbcc | DU333_14955 | Not Available | Positive | 2989938 - 2993081 | 118532.0 |
| mfs transporter araj | DU333_14960 | Not Available | Positive | 2993207 - 2994391 | 41963.0 |
| fructokinase | DU333_14965 | Not Available | Negative | 2994660 - 2995568 | 32511.6 |
| recombination-associated protein rdgc | DU333_14970 | Not Available | Positive | 2995693 - 2996604 | 33995.3 |
| hypothetical protein | DU333_14975 | Not Available | Negative | 2996685 - 2996765 | 3060.81 |
| pyrimidine/purine nucleoside phosphorylase | DU333_14985 | Not Available | Negative | 2997251 - 2997535 | 10234.9 |
| arom family protein | DU333_14990 | Not Available | Negative | 2997607 - 2998284 | 24932.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




