Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | DU333_14840 | Not Available | Positive | 2965653 - 2967515 | 67606.9 |
| aldo/keto reductase | DU333_14845 | Not Available | Positive | 2967570 - 2968544 | 36449.2 |
| phosphatidylglycerophosphatase a | DU333_14850 | Not Available | Negative | 2968598 - 2969116 | 19449.3 |
| thiamine-phosphate kinase | DU333_14855 | Not Available | Negative | 2969094 - 2970071 | 35072.8 |
| n utilization substance protein b | DU333_14860 | Not Available | Negative | 2970149 - 2970568 | 15689.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | DU333_14865 | Not Available | Negative | 2970588 - 2971058 | 16171.5 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DU333_14870 | Not Available | Negative | 2971147 - 2972250 | 40387.7 |
| transcriptional regulator nrdr | DU333_14875 | Not Available | Negative | 2972254 - 2972703 | 17229.9 |
| duf3251 domain-containing protein | DU333_14880 | Not Available | Positive | 2972854 - 2973393 | 19609.6 |
| nucleoside-specific channel-forming protein tsx | DU333_14885 | Not Available | Positive | 2973691 - 2974575 | 33625.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




