Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna-damage-inducible protein d | DU333_18110 | Not Available | Positive | 3647546 - 3648370 | 31232.8 |
| Attr | Not Available | Not Available | Positive | 3648382 - 3648396 | Not Available |
| trimeric intracellular cation channel family protein | DU333_18115 | Not Available | Positive | 3648662 - 3649279 | 22049.8 |
| Dna ligase (nad(+)) | DU333_18120 | Not Available | Negative | 3649276 - 3650958 | 63231.8 |
| Hypothetical protein | DU333_18125 | Not Available | Positive | 3651216 - 3651839 | 23594.1 |
| Tail protein | DU333_21125 | Not Available | Negative | 4250410 - 4251584 | 41104.9 |
| Tail protein i | DU333_21130 | Not Available | Negative | 4251581 - 4252186 | 22499.8 |
| Attl | Not Available | Not Available | Positive | 4251681 - 4251693 | Not Available |
| Baseplate assembly protein | DU333_21135 | Not Available | Negative | 4252179 - 4253087 | 32653.8 |
| Phage baseplate assembly protein | DU333_21140 | Not Available | Negative | 4253074 - 4253433 | 12905.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




