Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter outer membrane subunit | DU333_14230 | Not Available | Negative | 2837379 - 2838761 | 50739.9 |
| copper response regulator transcription factor cusr | DU333_14235 | Not Available | Positive | 2838918 - 2839601 | 25396.1 |
| cu(+)/ag(+) sensor histidine kinase cuss | DU333_14240 | Not Available | Positive | 2839591 - 2841033 | 53779.3 |
| bacteriophage n4 adsorption protein b | DU333_14245 | Not Available | Positive | 2841183 - 2843420 | 85294.2 |
| phage receptor | DU333_14250 | Not Available | Positive | 2843407 - 2846379 | 111357.0 |
| duf4434 family protein | DU333_14255 | Not Available | Positive | 2846380 - 2847270 | 33031.6 |
| omptin family outer membrane protease ompt | DU333_14260 | Not Available | Positive | 2847928 - 2848881 | 35569.2 |
| class i sam-dependent methyltransferase | DU333_14265 | Not Available | Positive | 2849113 - 2849781 | 24504.5 |
| nucleocapsid protein | DU333_14270 | Not Available | Negative | 2849738 - 2849863 | 4796.21 |
| phage tail protein | DU333_14275 | Not Available | Negative | 2849836 - 2850141 | 11467.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




