Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endolytic peptidoglycan transglycosylase rlpa | DU333_13930 | Not Available | Positive | 2772899 - 2773987 | 37584.2 |
| d-alanyl-d-alanine carboxypeptidase | DU333_13935 | Not Available | Positive | 2774127 - 2775338 | 44446.5 |
| duf493 family protein | DU333_13940 | Not Available | Positive | 2775448 - 2775711 | 9827.92 |
| octanoyltransferase | DU333_13945 | Not Available | Positive | 2775812 - 2776453 | 23884.0 |
| lipoyl synthase | DU333_13950 | Not Available | Positive | 2777273 - 2778238 | 36073.8 |
| twin-arginine translocase subunit tate | DU333_13955 | Not Available | Negative | 2778338 - 2778541 | 7024.71 |
| deaminated glutathione amidase | DU333_13960 | Not Available | Negative | 2778670 - 2779458 | 28650.0 |
| fluoride efflux transporter crcb | DU333_13965 | Not Available | Positive | 2779554 - 2779937 | 13766.1 |
| cold-shock protein cspe | DU333_13970 | Not Available | Negative | 2779991 - 2780200 | 7463.84 |
| phospholipid:lipid a palmitoyltransferase | DU333_13975 | Not Available | Negative | 2780375 - 2780935 | 21787.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




