Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc ribbon-containing protein | DU333_13880 | Not Available | Negative | 2762589 - 2763071 | 18798.2 |
| leucine--trna ligase | DU333_13885 | Not Available | Positive | 2763306 - 2765888 | 97312.1 |
| lps assembly lipoprotein lpte | DU333_13890 | Not Available | Positive | 2765903 - 2766484 | 21357.8 |
| dna polymerase iii subunit delta | DU333_13895 | Not Available | Positive | 2766484 - 2767515 | 38722.0 |
| nicotinate-nucleotide adenylyltransferase | DU333_13900 | Not Available | Positive | 2767517 - 2768158 | 24561.4 |
| adenosylcobalamin/alpha-ribazole phosphatase | DU333_13905 | Not Available | Positive | 2768182 - 2768793 | 23418.8 |
| ribosome silencing factor rsfs | DU333_13910 | Not Available | Positive | 2769053 - 2769370 | 11582.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | DU333_13915 | Not Available | Positive | 2769374 - 2769841 | 17342.1 |
| penicillin-binding protein 2 | DU333_13920 | Not Available | Positive | 2769872 - 2771773 | 70860.6 |
| rod shape-determining protein roda | DU333_13925 | Not Available | Positive | 2771776 - 2772888 | 40492.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




