Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | DU333_13575 | Not Available | Negative | 2704491 - 2705717 | 45973.0 |
| yfir family protein | DU333_13580 | Not Available | Negative | 2705707 - 2706225 | 18947.1 |
| duf2799 domain-containing protein | DU333_13585 | Not Available | Negative | 2706374 - 2706739 | 13232.4 |
| 3-deoxy-7-phosphoheptulonate synthase arof | DU333_13590 | Not Available | Positive | 2706948 - 2708018 | 38776.2 |
| bifunctional chorismate mutase/prephenate dehydrogenase | DU333_13595 | Not Available | Positive | 2708029 - 2709150 | 42032.9 |
| bifunctional chorismate mutase/prephenate dehydratase | DU333_13600 | Not Available | Negative | 2709193 - 2710353 | 43056.8 |
| hypothetical protein | DU333_13605 | Not Available | Negative | 2710452 - 2710499 | 1912.35 |
| ribosome-associated inhibitor a | DU333_13610 | Not Available | Negative | 2710603 - 2710944 | 12785.3 |
| outer membrane protein assembly factor bamd | DU333_13615 | Not Available | Negative | 2711214 - 2711951 | 27830.9 |
| ribosomal large subunit pseudouridine synthase d | DU333_13620 | Not Available | Positive | 2712086 - 2713066 | 37157.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




