Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine/l-proline abc transporter atp-binding protein | DU333_13040 | Not Available | Negative | 2629551 - 2630753 | 44135.5 |
| hypothetical protein | DU333_13045 | Not Available | Negative | 2630743 - 2630991 | 9400.42 |
| class 1b ribonucleoside-diphosphate reductase subunit beta | DU333_13050 | Not Available | Negative | 2631109 - 2632068 | 36457.0 |
| class 1b ribonucleoside-diphosphate reductase subunit alpha | DU333_13055 | Not Available | Negative | 2632078 - 2634222 | 80384.3 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | DU333_13060 | Not Available | Negative | 2634195 - 2634605 | 15371.3 |
| nrdh-redoxin | DU333_13065 | Not Available | Negative | 2634602 - 2634847 | 9139.0 |
| hypothetical protein | DU333_13070 | Not Available | Negative | 2634863 - 2635051 | 6968.53 |
| carboxymuconolactone decarboxylase family protein | DU333_13075 | Not Available | Negative | 2635056 - 2635487 | 16175.4 |
| plp-dependent aminotransferase family protein | DU333_13080 | Not Available | Positive | 2635575 - 2636909 | 49768.1 |
| duf883 domain-containing protein | DU333_13085 | Not Available | Negative | 2636966 - 2637295 | 11847.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




