Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly(a) polymerase | DU333_12990 | Not Available | Negative | 2619333 - 2620445 | 43236.1 |
| 2'-5' rna ligase | DU333_12995 | Not Available | Negative | 2620442 - 2621149 | 27772.3 |
| multidrug efflux mfs transporter permease subunit emrb | DU333_13000 | Not Available | Negative | 2621407 - 2622945 | 55609.6 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emra | DU333_13005 | Not Available | Negative | 2622962 - 2624134 | 42724.5 |
| multidrug efflux transporter emrab transcriptional repressor emrr | DU333_13010 | Not Available | Negative | 2624261 - 2624791 | 20564.7 |
| l-valine transporter subunit ygah | DU333_13015 | Not Available | Negative | 2624882 - 2625217 | 12040.3 |
| branched-chain amino acid abc transporter permease | DU333_13020 | Not Available | Negative | 2625207 - 2625944 | 26109.1 |
| mfs transporter | DU333_13025 | Not Available | Negative | 2626068 - 2627252 | 41688.9 |
| proline/glycine betaine abc transporter substrate-binding protein prox | DU333_13030 | Not Available | Negative | 2627444 - 2628436 | 36010.4 |
| proline/glycine betaine abc transporter permease prow | DU333_13035 | Not Available | Negative | 2628494 - 2629558 | 37522.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




