Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | DU333_12840 | Not Available | Positive | 2590878 - 2591297 | 15417.2 |
| 6-phospho-beta-glucosidase | DU333_12845 | Not Available | Negative | 2591395 - 2592819 | 53847.7 |
| pts cellobiose/arbutin/salicin transporter subunit iibc | DU333_12850 | Not Available | Negative | 2592828 - 2594285 | 50976.0 |
| laci family dna-binding transcriptional regulator | DU333_12855 | Not Available | Positive | 2594542 - 2595555 | 36889.5 |
| electron transporter hydn | DU333_12860 | Not Available | Positive | 2595704 - 2596231 | 19027.2 |
| carbamoyltransferase hypf | DU333_12865 | Not Available | Positive | 2596384 - 2598636 | 81780.5 |
| nitric oxide reductase flrd-nad+ reductase | DU333_12870 | Not Available | Negative | 2598860 - 2599993 | 41335.1 |
| anaerobic nitric oxide reductase flavorubredoxin | DU333_12875 | Not Available | Negative | 2599990 - 2601429 | 54146.9 |
| norr family transcriptional regulator | DU333_12880 | Not Available | Positive | 2601616 - 2603130 | 55189.6 |
| arabinose 5-phosphate isomerase gutq | DU333_12885 | Not Available | Negative | 2603127 - 2604092 | 34071.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




