Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase regulatory protein hyca | DU333_12790 | Not Available | Positive | 2582780 - 2583241 | 17642.0 |
| 4fe-4s dicluster domain-containing protein | DU333_12795 | Not Available | Positive | 2583366 - 2583977 | 21906.4 |
| formate hydrogenlyase subunit 3 | DU333_12800 | Not Available | Positive | 2583974 - 2585800 | 64171.3 |
| hydrogenase 3 membrane subunit | DU333_12805 | Not Available | Positive | 2585803 - 2586726 | 33000.4 |
| formate hydrogenlyase subunit 5 | DU333_12810 | Not Available | Positive | 2586744 - 2588453 | 64970.1 |
| 4fe-4s dicluster domain-containing protein | DU333_12815 | Not Available | Positive | 2588463 - 2589005 | 20329.4 |
| nadh-quinone oxidoreductase subunit nuob | DU333_12820 | Not Available | Positive | 2589005 - 2589772 | 27999.7 |
| formate hydrogenlyase maturation protein hych | DU333_12825 | Not Available | Positive | 2589769 - 2590179 | 15451.5 |
| hydrogenase maturation peptidase hyci | DU333_12830 | Not Available | Positive | 2590172 - 2590642 | 17013.5 |
| hypothetical protein | DU333_12835 | Not Available | Positive | 2590667 - 2590852 | 6996.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




