Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpos | DU333_12690 | Not Available | Positive | 2563152 - 2564144 | 37975.1 |
| flavodoxin family protein | DU333_12695 | Not Available | Negative | 2564322 - 2564873 | 19579.0 |
| mbl fold metallo-hydrolase | DU333_12700 | Not Available | Positive | 2565098 - 2566141 | 39741.4 |
| gntp family transporter | DU333_12705 | Not Available | Negative | 2566284 - 2567648 | 46844.8 |
| hpr family phosphocarrier protein | DU333_12710 | Not Available | Negative | 2567737 - 2568513 | 29234.6 |
| aldolase | DU333_12715 | Not Available | Negative | 2568518 - 2569156 | 23296.8 |
| four-carbon acid sugar kinase family protein | DU333_12720 | Not Available | Negative | 2569153 - 2570415 | 44907.7 |
| nad(p)-dependent oxidoreductase | DU333_12725 | Not Available | Negative | 2570412 - 2571320 | 30692.1 |
| deor/glpr transcriptional regulator | DU333_12730 | Not Available | Positive | 2571516 - 2572283 | 27472.4 |
| protein-serine/threonine phosphatase | DU333_12735 | Not Available | Negative | 2572334 - 2572990 | 25155.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




