Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haaap family serine/threonine permease | DU333_12435 | Not Available | Negative | 2508920 - 2510209 | 46923.3 |
| log family protein ygdh | DU333_12440 | Not Available | Negative | 2510766 - 2512130 | 50975.0 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | DU333_12445 | Not Available | Negative | 2512242 - 2513090 | 32559.2 |
| protein syd | DU333_12450 | Not Available | Positive | 2513158 - 2513703 | 20709.6 |
| yqcc family protein | DU333_12455 | Not Available | Positive | 2514325 - 2514654 | 12715.2 |
| trna pseudouridine(65) synthase truc | DU333_12460 | Not Available | Positive | 2514654 - 2515436 | 29652.5 |
| flavodoxin | DU333_12465 | Not Available | Positive | 2515454 - 2515903 | 16302.1 |
| mfs transporter | DU333_12470 | Not Available | Positive | 2516337 - 2517689 | 49145.0 |
| glucarate dehydratase | DU333_12475 | Not Available | Positive | 2517691 - 2519031 | 48967.5 |
| glucarate dehydratase | DU333_12480 | Not Available | Positive | 2519052 - 2520392 | 49096.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




