Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU333_12280 | Not Available | Negative | 2475725 - 2476018 | 11526.8 |
| hypothetical protein | DU333_12285 | Not Available | Negative | 2475987 - 2476820 | 32021.6 |
| type vi secretion system tip protein vgrg | DU333_12295 | Not Available | Negative | 2478574 - 2481054 | 91710.5 |
| type vi secretion system atpase tssh | DU333_12300 | Not Available | Negative | 2481066 - 2483711 | 98029.4 |
| hcp family type vi secretion system effector | DU333_12305 | Not Available | Negative | 2483903 - 2484394 | 18579.8 |
| ompa family protein | DU333_12310 | Not Available | Negative | 2484452 - 2486104 | 60409.3 |
| dotu family type iv/vi secretion system protein | DU333_12315 | Not Available | Negative | 2486117 - 2486782 | 25311.8 |
| type vi secretion system baseplate subunit tssk | DU333_12320 | Not Available | Negative | 2486779 - 2488116 | 49718.8 |
| type vi secretion system contractile sheath large subunit | DU333_12325 | Not Available | Negative | 2488134 - 2489672 | 58021.7 |
| type vi secretion system contractile sheath small subunit | DU333_12330 | Not Available | Negative | 2489731 - 2490231 | 18726.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




