Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ef2563 family selenium-dependent molybdenum hydroxylase system protein | DU333_11980 | Not Available | Positive | 2399986 - 2401611 | 57731.5 |
| carbamate kinase | DU333_11985 | Not Available | Negative | 2401652 - 2402584 | 33058.0 |
| d-phenylhydantoinase | DU333_11990 | Not Available | Negative | 2402632 - 2404017 | 50974.1 |
| ygey family selenium metabolism-linked hydrolase | DU333_11995 | Not Available | Negative | 2404070 - 2405281 | 44806.4 |
| diaminopropionate ammonia-lyase | DU333_12000 | Not Available | Negative | 2405339 - 2406535 | 43311.0 |
| knotted carbamoyltransferase ygew | DU333_12005 | Not Available | Negative | 2406593 - 2407780 | 44058.7 |
| sigma-54-dependent fis family transcriptional regulator | DU333_12010 | Not Available | Positive | 2408259 - 2410037 | 66042.9 |
| xanthine dehydrogenase iron sulfur-binding subunit xdhc | DU333_12015 | Not Available | Negative | 2410077 - 2410556 | 16921.8 |
| xanthine dehydrogenase fad-binding subunit xdhb | DU333_12020 | Not Available | Negative | 2410553 - 2411431 | 31519.5 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | DU333_12025 | Not Available | Negative | 2411442 - 2413739 | 82677.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




