Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase xerd | DU333_11880 | Not Available | Positive | 2374482 - 2375378 | 34262.4 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | DU333_11885 | Not Available | Positive | 2375403 - 2376113 | 25637.1 |
| single-stranded-dna-specific exonuclease recj | DU333_11890 | Not Available | Positive | 2376119 - 2377852 | 63348.6 |
| peptide chain release factor 2 | DU333_11895 | Not Available | Positive | 2377943 - 2379041 | 41222.9 |
| lysine--trna ligase | DU333_11900 | Not Available | Positive | 2379051 - 2380568 | 57606.8 |
| isopentenyl-diphosphate delta-isomerase | DU333_11905 | Not Available | Negative | 2380611 - 2381159 | 20482.4 |
| hypothetical protein | DU333_11910 | Not Available | Positive | 2381214 - 2381285 | 2617.29 |
| hypothetical protein | DU333_11915 | Not Available | Negative | 2381282 - 2381407 | 4757.28 |
| uric acid transporter uact | DU333_11920 | Not Available | Negative | 2381409 - 2382857 | 51745.4 |
| oxidoreductase (fe-s)-binding subunit | DU333_11925 | Not Available | Positive | 2383293 - 2385212 | 69061.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




