Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-adenosylmethionine synthase | DU333_11620 | Not Available | Negative | 2327392 - 2328546 | 41954.0 |
| duf2684 family protein | DU333_11625 | Not Available | Positive | 2328602 - 2328853 | 9534.78 |
| hypothetical protein | DU333_11630 | Not Available | Negative | 2328850 - 2329065 | 8148.99 |
| virulence promoting factor | DU333_11635 | Not Available | Positive | 2329201 - 2329332 | 4859.08 |
| arginine decarboxylase | DU333_11640 | Not Available | Positive | 2329341 - 2331317 | 73890.6 |
| hypothetical protein | DU333_11645 | Not Available | Positive | 2331463 - 2332194 | 26352.8 |
| agmatinase | DU333_11650 | Not Available | Positive | 2332330 - 2333250 | 33572.9 |
| metalloprotease | DU333_11655 | Not Available | Negative | 2333454 - 2334212 | 26962.1 |
| transketolase | DU333_11660 | Not Available | Positive | 2334490 - 2336481 | 72200.6 |
| prohibitin family protein | DU333_11665 | Not Available | Negative | 2336701 - 2337609 | 33040.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




